Failure to comply with MTD requirements may result in penalties in addition to standard VAT obligations. HMRC operates a points-based penalty system for late VAT return submissions, alongside interest charges on late VAT payments.
Separate penalties may apply where VAT returns contain inaccuracies, depending on whether errors are deemed careless, deliberate, or concealed. Penalty reductions may be available where businesses make voluntary disclosures and cooperate with HMRC.